Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ycio protein | A33Q_1945 | Not Available | Positive | 1999863 - 2000492 | 23352.3 |
| hypothetical protein | A33Q_1946 | Not Available | Positive | 2000517 - 2001143 | 24455.7 |
| atp-dependent clp protease atp-binding subunit clpa | A33Q_1947 | Not Available | Positive | 2001218 - 2003749 | 94352.4 |
| linoleoyl-coa desaturase | A33Q_1948 | Not Available | Negative | 2004006 - 2005109 | 42732.2 |
| hypothetical protein | A33Q_1949 | Not Available | Negative | 2005204 - 2005389 | 7378.99 |
| na(+)/h(+) antiporter | A33Q_1950 | Not Available | Positive | 2005981 - 2007462 | 54115.6 |
| hypothetical protein | A33Q_1951 | Not Available | Positive | 2007469 - 2007822 | 13660.4 |
| hypothetical protein | A33Q_1952 | Not Available | Positive | 2007902 - 2008381 | 18510.8 |
| putative integral membrane protein, putative | A33Q_1953 | Not Available | Positive | 2008465 - 2009373 | 34026.8 |
| hypothetical protein | A33Q_1954 | Not Available | Positive | 2009401 - 2010336 | 35320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
