Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family | A33Q_1925 | Not Available | Negative | 1981345 - 1982232 | 33109.1 |
| hypothetical protein | A33Q_1926 | Not Available | Negative | 1982516 - 1983457 | 32685.8 |
| hypothetical protein | A33Q_1927 | Not Available | Negative | 1983469 - 1984293 | 31055.7 |
| hypothetical protein | A33Q_1928 | Not Available | Negative | 1984314 - 1985333 | 37936.1 |
| hypothetical protein | A33Q_1929 | Not Available | Negative | 1985373 - 1986128 | 28373.8 |
| rna polymerase ecf-type sigma factor | A33Q_1930 | Not Available | Negative | 1986121 - 1986690 | 21972.7 |
| glycosyl transferase, family 2 | A33Q_1931 | Not Available | Negative | 1986851 - 1987660 | 30915.4 |
| hypothetical protein | A33Q_1932 | Not Available | Negative | 1987874 - 1987993 | 4657.93 |
| putative auxin-regulated protein | A33Q_1933 | Not Available | Positive | 1988069 - 1989592 | 57936.9 |
| hypothetical protein | A33Q_1934 | Not Available | Negative | 1989600 - 1990166 | 21615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
