Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic aromatic amino acid aminotransferase alpha | A33Q_1915 | Not Available | Positive | 1969953 - 1971116 | 43384.4 |
| prephenate and/or arogenate dehydrogenase (unknown specificity) | A33Q_1916 | Not Available | Positive | 1971120 - 1971968 | 31016.5 |
| hypothetical protein | A33Q_1917 | Not Available | Positive | 1972164 - 1972868 | 26347.9 |
| acetylornithine deacetylase | A33Q_1918 | Not Available | Positive | 1973280 - 1974800 | 56897.5 |
| hypothetical protein | A33Q_1919 | Not Available | Negative | 1975016 - 1975984 | 36880.5 |
| peptidase m20 | A33Q_1920 | Not Available | Positive | 1976188 - 1977294 | 39934.9 |
| alpha-l-fucosidase | A33Q_1921 | Not Available | Negative | 1977334 - 1979121 | 69009.9 |
| hypothetical protein | A33Q_1922 | Not Available | Negative | 1979222 - 1979341 | 4531.82 |
| putative secreted protein | A33Q_1923 | Not Available | Positive | 1979340 - 1980083 | 27466.5 |
| hypothetical protein | A33Q_1924 | Not Available | Positive | 1980153 - 1981028 | 33083.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
