Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1905 | Not Available | Positive | 1959895 - 1963560 | 142093.0 |
| multimeric flavodoxin | A33Q_1906 | Not Available | Positive | 1963660 - 1964232 | 20598.2 |
| protein of unknown function duf418 | A33Q_1907 | Not Available | Positive | 1964314 - 1965657 | 51925.3 |
| hypothetical protein | A33Q_1908 | Not Available | Positive | 1965715 - 1966098 | 14896.0 |
| hypothetical protein | A33Q_1909 | Not Available | Negative | 1966354 - 1966473 | 4435.41 |
| hypothetical protein | A33Q_1910 | Not Available | Negative | 1966448 - 1966579 | 5002.26 |
| hypothetical protein | A33Q_1911 | Not Available | Negative | 1966617 - 1966739 | 5110.34 |
| protease ii | A33Q_1912 | Not Available | Positive | 1966740 - 1968728 | 76083.2 |
| transmembrane signal peptide protein | A33Q_1913 | Not Available | Positive | 1968762 - 1969130 | 14169.9 |
| prephenate dehydratase | A33Q_1914 | Not Available | Positive | 1969127 - 1969942 | 30404.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
