Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hipa protein | A33Q_1895 | Not Available | Positive | 1946799 - 1948085 | 48805.3 |
| agmatine deiminase | A33Q_1896 | Not Available | Positive | 1948324 - 1949613 | 48942.4 |
| hypothetical protein | A33Q_1897 | Not Available | Positive | 1949824 - 1950345 | 20148.0 |
| short-chain dehydrogenase/reductase sdr | A33Q_1898 | Not Available | Positive | 1950530 - 1951327 | 28604.0 |
| amidohydrolase | A33Q_1899 | Not Available | Positive | 1951468 - 1951764 | 10955.2 |
| tonb-dependent receptor | A33Q_1900 | Not Available | Positive | 1952333 - 1955116 | 106663.0 |
| hypothetical protein | A33Q_1901 | Not Available | Positive | 1955155 - 1956504 | 48582.5 |
| putative integral membrane protein, putative | A33Q_1902 | Not Available | Positive | 1956552 - 1957502 | 36231.1 |
| internalin c2 (lpxtg motif) | A33Q_1903 | Not Available | Positive | 1957545 - 1959023 | 53845.2 |
| hypothetical protein | A33Q_1904 | Not Available | Positive | 1959381 - 1959662 | 11055.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
