Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction-modification system, specificity subunit s | A33Q_0175 | Not Available | Positive | 171512 - 172741 | 45782.3 |
| tir protein | A33Q_0176 | Not Available | Positive | 172752 - 173579 | 31707.0 |
| protein of unknown function duf262 | A33Q_0177 | Not Available | Positive | 173758 - 175542 | 68252.0 |
| hypothetical protein | A33Q_0178 | Not Available | Positive | 175568 - 176242 | 26342.4 |
| type i restriction-modification system, restriction subunit r | A33Q_0179 | Not Available | Positive | 176258 - 179143 | 111189.0 |
| hypothetical protein | A33Q_0180 | Not Available | Positive | 179258 - 181318 | 78206.9 |
| hypothetical protein | A33Q_0181 | Not Available | Positive | 181661 - 181786 | 4788.91 |
| hypothetical protein | A33Q_0182 | Not Available | Positive | 181912 - 182769 | 32676.3 |
| hypothetical protein | A33Q_0183 | Not Available | Negative | 182802 - 182948 | 5401.85 |
| hypothetical protein | A33Q_0184 | Not Available | Positive | 182950 - 183084 | 5018.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
