Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dimethylallyltransferase | A33Q_1875 | Not Available | Positive | 1934659 - 1935576 | 35760.9 |
| hypothetical protein | A33Q_1876 | Not Available | Negative | 1935587 - 1935931 | 13072.2 |
| 6-phosphofructokinase | A33Q_1877 | Not Available | Negative | 1935961 - 1936935 | 35118.4 |
| hypothetical protein | A33Q_1878 | Not Available | Positive | 1936973 - 1937107 | 5118.36 |
| single-stranded dna-binding protein | A33Q_1879 | Not Available | Negative | 1937151 - 1937495 | 13082.5 |
| hypothetical protein | A33Q_1880 | Not Available | Positive | 1937544 - 1937696 | 5816.46 |
| carboxypeptidase-related protein | A33Q_1881 | Not Available | Positive | 1937737 - 1939245 | 56816.7 |
| hypothetical protein | A33Q_1882 | Not Available | Negative | 1939320 - 1939646 | 12114.7 |
| sensor histidine kinase | A33Q_1883 | Not Available | Positive | 1940029 - 1942044 | 76340.9 |
| hypothetical protein | A33Q_1884 | Not Available | Positive | 1942507 - 1943076 | 20637.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
