Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | A33Q_1865 | Not Available | Positive | 1925495 - 1926925 | 52101.2 |
| sensory subunit of low co2-induced protein complex, putative | A33Q_1866 | Not Available | Positive | 1927146 - 1928594 | 49285.0 |
| putative two-component system sensor protein histidine kinase | A33Q_1867 | Not Available | Positive | 1928713 - 1929756 | 40255.0 |
| two-component system response regulator | A33Q_1868 | Not Available | Positive | 1929716 - 1930486 | 30274.6 |
| hypothetical protein | A33Q_1869 | Not Available | Positive | 1930491 - 1930856 | 13134.3 |
| fibronectin/fibrinogen-binding protein | A33Q_1870 | Not Available | Negative | 1930857 - 1932425 | 60356.8 |
| metal-dependent hydrolases of the beta-lactamase superfamily i | A33Q_1871 | Not Available | Negative | 1932426 - 1933190 | 28965.2 |
| hypothetical protein | A33Q_1872 | Not Available | Negative | 1933187 - 1933465 | 10776.2 |
| sensor for ctr capsule biosynthesis, probable histidine kinase acting on rcsb | A33Q_1873 | Not Available | Negative | 1933477 - 1933854 | 14170.3 |
| periplasmic sensor hybrid histidine kinase | A33Q_1874 | Not Available | Negative | 1933851 - 1934636 | 30132.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
