Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1855 | Not Available | Negative | 1915952 - 1916671 | 26207.1 |
| hypothetical protein | A33Q_1856 | Not Available | Positive | 1917071 - 1917793 | 27933.3 |
| tonb-dependent receptor | A33Q_1857 | Not Available | Negative | 1917861 - 1919303 | 56056.6 |
| hypothetical protein | A33Q_1858 | Not Available | Negative | 1919451 - 1919591 | 4925.97 |
| prolipoprotein diacylglyceryl transferase | A33Q_1859 | Not Available | Negative | 1919588 - 1920712 | 42586.8 |
| nad synthetase | A33Q_1860 | Not Available | Negative | 1920755 - 1922602 | 69904.8 |
| ribonuclease iii | A33Q_1861 | Not Available | Negative | 1922647 - 1923387 | 28022.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase, kasii | A33Q_1862 | Not Available | Negative | 1923389 - 1924642 | 44460.9 |
| acyl carrier protein | A33Q_1863 | Not Available | Negative | 1924661 - 1924900 | 8562.97 |
| hypothetical protein | A33Q_1864 | Not Available | Positive | 1925053 - 1925481 | 16878.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
