Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1835 | Not Available | Positive | 1892332 - 1892559 | 8932.59 |
| hypothetical protein | A33Q_1836 | Not Available | Negative | 1892556 - 1892672 | 4279.26 |
| transcriptional regulator, arac family | A33Q_1837 | Not Available | Negative | 1892740 - 1893756 | 38798.0 |
| hypothetical protein | A33Q_1838 | Not Available | Negative | 1895549 - 1895944 | 15475.8 |
| hypothetical protein | A33Q_1839 | Not Available | Negative | 1896181 - 1896336 | 5513.98 |
| hypothetical protein | A33Q_1840 | Not Available | Negative | 1896464 - 1896583 | 4422.46 |
| hypothetical protein | A33Q_1841 | Not Available | Negative | 1896714 - 1897091 | 14937.7 |
| rna methyltransferase, trma family | A33Q_1842 | Not Available | Negative | 1897088 - 1898500 | 53746.3 |
| short-chain dehydrogenase/reductase sdr | A33Q_1843 | Not Available | Positive | 1898666 - 1899478 | 29514.8 |
| long-chain-fatty-acid--coa ligase | A33Q_1844 | Not Available | Positive | 1899479 - 1903417 | 153464.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
