Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1825 | Not Available | Negative | 1883786 - 1883905 | 4620.83 |
| hypothetical protein | A33Q_1826 | Not Available | Positive | 1883948 - 1884322 | 13961.8 |
| hypothetical protein | A33Q_1827 | Not Available | Positive | 1884669 - 1884917 | 9416.2 |
| hypothetical protein | A33Q_1828 | Not Available | Positive | 1884960 - 1885097 | 5092.25 |
| lipoprotein, putative | A33Q_1829 | Not Available | Positive | 1885108 - 1885848 | 27492.1 |
| cytochrome c551 peroxidase | A33Q_1830 | Not Available | Positive | 1885912 - 1886916 | 38151.1 |
| hypothetical protein | A33Q_1831 | Not Available | Positive | 1886999 - 1887871 | 33066.1 |
| cytosolic long-chain acyl-coa thioester hydrolase family protein | A33Q_1832 | Not Available | Negative | 1888097 - 1888483 | 14517.7 |
| two-component hybrid sensor and regulator | A33Q_1833 | Not Available | Negative | 1888480 - 1889049 | 21702.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | A33Q_1834 | Not Available | Negative | 1889116 - 1891422 | 87881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
