Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1795 | Not Available | Negative | 1841508 - 1841747 | 9208.44 |
| dna repair protein radc | A33Q_1796 | Not Available | Positive | 1841820 - 1841990 | 6410.84 |
| response regulator receiver | A33Q_1797 | Not Available | Negative | 1842243 - 1842974 | 28046.0 |
| two-component hybrid sensor and regulator | A33Q_1798 | Not Available | Positive | 1843128 - 1845428 | 88164.9 |
| hypothetical protein | A33Q_1799 | Not Available | Positive | 1845978 - 1848089 | 77744.9 |
| sensory box histidine kinase/response regulator | A33Q_1800 | Not Available | Positive | 1848093 - 1849769 | 65238.7 |
| tonb-dependent receptor | A33Q_1801 | Not Available | Positive | 1850213 - 1856473 | 220596.0 |
| hypothetical protein | A33Q_1802 | Not Available | Positive | 1856572 - 1857447 | 32418.5 |
| outer membrane lipoprotein omp16 precursor | A33Q_1803 | Not Available | Positive | 1857458 - 1859416 | 74590.7 |
| hypothetical protein | A33Q_1804 | Not Available | Negative | 1859540 - 1860034 | 18519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
