Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1785 | Not Available | Positive | 1825041 - 1825628 | 22883.8 |
| beta-galactosidase | A33Q_1786 | Not Available | Negative | 1825911 - 1826984 | 40692.9 |
| rna polymerase ecf-type sigma factor | A33Q_1787 | Not Available | Positive | 1827425 - 1828024 | 23806.9 |
| anti-feci sigma factor, fecr | A33Q_1788 | Not Available | Positive | 1828068 - 1828988 | 34032.9 |
| tonb-dependent receptor | A33Q_1789 | Not Available | Positive | 1829082 - 1832393 | 122051.0 |
| susd, outer membrane protein | A33Q_1790 | Not Available | Positive | 1832484 - 1834055 | 59385.9 |
| putative acid phosphatase | A33Q_1791 | Not Available | Positive | 1834087 - 1834995 | 34792.9 |
| tonb-dependent receptor | A33Q_1792 | Not Available | Positive | 1835803 - 1838979 | 117259.0 |
| tonb-dependent receptor | A33Q_1793 | Not Available | Positive | 1838990 - 1840648 | 62869.0 |
| hypothetical protein | A33Q_1794 | Not Available | Negative | 1840808 - 1841416 | 23647.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
