Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | A33Q_0166 | Not Available | Negative | 163343 - 163627 | 11210.3 |
| hypothetical protein | A33Q_0167 | Not Available | Negative | 163822 - 164508 | 25610.1 |
| hypothetical protein | A33Q_0168 | Not Available | Negative | 164835 - 166085 | 47316.1 |
| hypothetical protein | A33Q_0169 | Not Available | Positive | 166399 - 166512 | 4135.21 |
| Trna-arg | Not Available | Not Available | Positive | 166554 - 166630 | Not Available |
| tn5520-like integrase (transfer factor) | A33Q_0170 | Not Available | Positive | 166802 - 168076 | 49618.0 |
| hypothetical protein | A33Q_0171 | Not Available | Positive | 168311 - 168451 | 5241.42 |
| hypothetical protein | A33Q_0172 | Not Available | Positive | 168720 - 169616 | 34398.4 |
| hypothetical protein | A33Q_0173 | Not Available | Negative | 169767 - 169913 | 5862.27 |
| type i restriction-modification system, dna-methyltransferase subunit m | A33Q_0174 | Not Available | Positive | 169944 - 171512 | 59112.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
