Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1765 | Not Available | Negative | 1814501 - 1815127 | 23997.6 |
| dna repair protein radc | A33Q_1766 | Not Available | Negative | 1815134 - 1815832 | 25687.3 |
| ssu ribosomal protein s20p | A33Q_1767 | Not Available | Negative | 1815975 - 1816229 | 9748.04 |
| hypothetical protein | A33Q_1768 | Not Available | Positive | 1816433 - 1817467 | 40155.2 |
| aspartate aminotransferase | A33Q_1769 | Not Available | Negative | 1817421 - 1818749 | 50169.5 |
| hypothetical protein | A33Q_1770 | Not Available | Positive | 1819009 - 1819221 | 8424.48 |
| hypothetical protein | A33Q_1771 | Not Available | Negative | 1819227 - 1819625 | 14972.5 |
| hypothetical protein | A33Q_1772 | Not Available | Negative | 1819728 - 1820237 | 19180.2 |
| response regulator liar | A33Q_1773 | Not Available | Negative | 1820349 - 1820840 | 18682.2 |
| hypothetical protein | A33Q_1774 | Not Available | Negative | 1820916 - 1821068 | 6042.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
