Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1755 | Not Available | Positive | 1806126 - 1806359 | 9121.95 |
| hypothetical protein | A33Q_1756 | Not Available | Positive | 1806574 - 1806690 | 4300.49 |
| hypothetical protein | A33Q_1757 | Not Available | Positive | 1806723 - 1806920 | 7731.4 |
| acetylornithine deacetylase | A33Q_1758 | Not Available | Negative | 1807184 - 1808467 | 46069.2 |
| hypothetical protein | A33Q_1759 | Not Available | Negative | 1808545 - 1808661 | 4314.33 |
| hypothetical protein | A33Q_1760 | Not Available | Negative | 1808715 - 1809506 | 30739.4 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | A33Q_1761 | Not Available | Negative | 1809706 - 1811271 | 58477.8 |
| hypothetical protein | A33Q_1762 | Not Available | Negative | 1811337 - 1811621 | 10986.3 |
| hypothetical protein | A33Q_1763 | Not Available | Negative | 1811623 - 1811907 | 11082.4 |
| phenylalanyl-trna synthetase beta chain | A33Q_1764 | Not Available | Negative | 1811910 - 1814321 | 89250.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
