Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-allo-threonine aldolase | A33Q_1745 | Not Available | Positive | 1791154 - 1792122 | 35118.6 |
| atpase, aaa family | A33Q_1746 | Not Available | Positive | 1793175 - 1794437 | 46976.0 |
| hypothetical protein | A33Q_1747 | Not Available | Negative | 1794725 - 1794919 | 7315.55 |
| hypothetical protein | A33Q_1748 | Not Available | Positive | 1794985 - 1795161 | 6831.48 |
| putative co/zn/cd efflux system membrane fusion protein | A33Q_1749 | Not Available | Positive | 1795192 - 1796265 | 38985.9 |
| rnd multidrug efflux transporter | A33Q_1750 | Not Available | Positive | 1796270 - 1799302 | 112484.0 |
| hypothetical protein | A33Q_1751 | Not Available | Positive | 1799757 - 1799948 | 7649.15 |
| putative abc transport system, membrane protein | A33Q_1752 | Not Available | Positive | 1800398 - 1803505 | 117403.0 |
| hypothetical protein | A33Q_1753 | Not Available | Negative | 1803741 - 1804937 | 46057.0 |
| putative abc transport system, membrane protein | A33Q_1754 | Not Available | Positive | 1805669 - 1805965 | 10572.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
