Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 4,6-dehydratase | A33Q_1715 | Not Available | Negative | 1763273 - 1765183 | 72013.4 |
| acetyltransferase | A33Q_1716 | Not Available | Negative | 1765360 - 1765944 | 20766.5 |
| 4-keto-6-deoxy-n-acetyl-d-hexosaminyl-(lipid carrier) aminotransferase | A33Q_1717 | Not Available | Negative | 1766007 - 1767146 | 42407.0 |
| thrombospondin type 3 repeat:ompa/motb | A33Q_1718 | Not Available | Negative | 1767469 - 1768761 | 47699.0 |
| hypothetical protein | A33Q_1719 | Not Available | Negative | 1768970 - 1770223 | 46810.2 |
| hypothetical protein | A33Q_1720 | Not Available | Positive | 1770752 - 1770868 | 4288.24 |
| hypothetical protein | A33Q_1721 | Not Available | Negative | 1770873 - 1771070 | 7516.22 |
| o-acetylhomoserine sulfhydrylase | A33Q_1722 | Not Available | Positive | 1771145 - 1772566 | 51969.9 |
| homoserine o-acetyltransferase | A33Q_1723 | Not Available | Positive | 1772664 - 1773695 | 38716.8 |
| hypothetical protein | A33Q_1724 | Not Available | Positive | 1773951 - 1774094 | 5128.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
