Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1705 | Not Available | Negative | 1751162 - 1752376 | 46689.5 |
| hypothetical protein | A33Q_1706 | Not Available | Negative | 1752376 - 1753614 | 47661.8 |
| glycosyl transferase, group 2 family protein | A33Q_1707 | Not Available | Negative | 1753619 - 1754968 | 50919.1 |
| hypothetical protein | A33Q_1708 | Not Available | Negative | 1755075 - 1756634 | 59467.7 |
| putative alkaline phosphatase synthesis transcriptional regulatory protein | A33Q_1709 | Not Available | Negative | 1756670 - 1757032 | 13324.1 |
| amidohydrolase family protein | A33Q_1710 | Not Available | Positive | 1757280 - 1758971 | 60220.7 |
| hypothetical protein | A33Q_1711 | Not Available | Positive | 1758982 - 1760364 | 50758.1 |
| putative amidohydrolase | A33Q_1712 | Not Available | Positive | 1760387 - 1761688 | 46932.2 |
| l-alanyl-gamma-d-glutamyl-l-diamino acid endopeptidase | A33Q_1713 | Not Available | Positive | 1761749 - 1762945 | 44841.6 |
| hypothetical protein | A33Q_1714 | Not Available | Positive | 1762951 - 1763271 | 11265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
