Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nitroreductase | A33Q_0156 | Not Available | Positive | 151903 - 152634 | 28306.5 |
| transcriptional regulator, meci family | A33Q_0157 | Not Available | Positive | 153237 - 153611 | 14657.5 |
| ferric siderophore transport system, periplasmic binding protein tonb | A33Q_0158 | Not Available | Positive | 153608 - 154849 | 47385.3 |
| hypothetical protein | A33Q_0159 | Not Available | Negative | 154994 - 156109 | 42090.1 |
| hypothetical protein | A33Q_0160 | Not Available | Positive | 156383 - 157369 | 36470.2 |
| hypothetical protein | A33Q_0161 | Not Available | Negative | 157602 - 158555 | 37054.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | A33Q_0162 | Not Available | Negative | 159075 - 160022 | 34446.8 |
| lysyl endopeptidase | A33Q_0163 | Not Available | Negative | 160241 - 161926 | 61318.1 |
| lysyl endopeptidase precursor | A33Q_0164 | Not Available | Negative | 162023 - 162385 | 13502.9 |
| hypothetical protein | A33Q_0165 | Not Available | Negative | 162478 - 162999 | 19965.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
