Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1635 | Not Available | Negative | 1686336 - 1686548 | 7892.36 |
| hypothetical protein | A33Q_1636 | Not Available | Negative | 1686550 - 1686870 | 12036.1 |
| phnb protein | A33Q_1637 | Not Available | Negative | 1686939 - 1687901 | 36997.8 |
| transcriptional regulator, arsr family | A33Q_1638 | Not Available | Negative | 1687898 - 1688224 | 12724.5 |
| hypothetical protein | A33Q_1639 | Not Available | Positive | 1688469 - 1688603 | 4973.02 |
| acetyltransferase, gnat family | A33Q_1640 | Not Available | Negative | 1688576 - 1689118 | 20196.6 |
| dihydrofolate reductase | A33Q_1641 | Not Available | Negative | 1689156 - 1689689 | 20300.4 |
| duf1801 domain-containing protein | A33Q_1642 | Not Available | Negative | 1689771 - 1690235 | 17701.5 |
| hypothetical protein | A33Q_1643 | Not Available | Negative | 1690399 - 1690788 | 14848.6 |
| rna polymerase ecf-type sigma factor | A33Q_1644 | Not Available | Positive | 1691191 - 1691772 | 22197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
