Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1525 | Not Available | Negative | 1554413 - 1554553 | 5386.66 |
| 2-oxoglutarate dehydrogenase e1 component | A33Q_1526 | Not Available | Positive | 1554951 - 1557749 | 105248.0 |
| dihydrolipoamide succinyltransferase component (e2) of 2-oxoglutarate dehydrogenase complex | A33Q_1527 | Not Available | Positive | 1557865 - 1559412 | 55365.7 |
| hypothetical protein | A33Q_1528 | Not Available | Positive | 1559547 - 1559903 | 13692.4 |
| dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase | A33Q_1529 | Not Available | Positive | 1559917 - 1561353 | 52105.4 |
| hypothetical protein | A33Q_1530 | Not Available | Negative | 1561616 - 1564156 | 94979.9 |
| peptide deformylase | A33Q_1531 | Not Available | Positive | 1564561 - 1565046 | 18974.9 |
| carbamoyl-phosphate synthase large chain | A33Q_1532 | Not Available | Positive | 1565264 - 1568083 | 104606.0 |
| hypothetical protein | A33Q_1533 | Not Available | Positive | 1568159 - 1568416 | 10178.2 |
| hypothetical protein | A33Q_1534 | Not Available | Positive | 1568796 - 1568912 | 4332.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
