Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1495 | Not Available | Positive | 1525444 - 1525560 | 4529.51 |
| hypothetical protein | A33Q_1496 | Not Available | Positive | 1525701 - 1526228 | 18985.8 |
| putative large multifunctional protein-putative glycosyl hydrolase | A33Q_1497 | Not Available | Positive | 1526378 - 1527412 | 37798.8 |
| hypothetical protein | A33Q_1498 | Not Available | Positive | 1528406 - 1529452 | 40012.0 |
| hypothetical protein | A33Q_1499 | Not Available | Positive | 1529455 - 1530198 | 27284.4 |
| putative thioredoxin | A33Q_1500 | Not Available | Negative | 1530387 - 1530599 | 8071.13 |
| outer membrane protein h precursor | A33Q_1501 | Not Available | Negative | 1530766 - 1531305 | 20439.4 |
| outer membrane protein h precursor | A33Q_1502 | Not Available | Negative | 1531327 - 1531830 | 19481.3 |
| outer membrane protein assembly factor yaet precursor | A33Q_1503 | Not Available | Negative | 1531860 - 1534562 | 102632.0 |
| undecaprenyl diphosphate synthase | A33Q_1504 | Not Available | Negative | 1534562 - 1535305 | 28222.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
