Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1475 | Not Available | Negative | 1507405 - 1508247 | 32041.4 |
| hypothetical protein | A33Q_1476 | Not Available | Negative | 1508404 - 1509279 | 32123.1 |
| transcriptional regulator, arac family | A33Q_1477 | Not Available | Negative | 1509427 - 1510545 | 42966.6 |
| transcriptional regulator, arac family | A33Q_1478 | Not Available | Positive | 1510794 - 1511942 | 45137.8 |
| beta-lactamase class c and other penicillin binding protein | A33Q_1479 | Not Available | Negative | 1512368 - 1512616 | 9567.46 |
| transforming growth factor-induced protein (and secreted protein mpb70) | A33Q_1480 | Not Available | Positive | 1512820 - 1513371 | 19142.4 |
| n-carbamoyl-l-amino acid hydrolase | A33Q_1481 | Not Available | Negative | 1513535 - 1514836 | 46977.7 |
| hypothetical protein | A33Q_1482 | Not Available | Negative | 1514865 - 1515116 | 9775.54 |
| response regulator | A33Q_1483 | Not Available | Negative | 1515209 - 1515952 | 28982.0 |
| sensor histidine kinase | A33Q_1484 | Not Available | Negative | 1516097 - 1518166 | 78882.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
