Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | A33Q_1450 | Not Available | Negative | 1492758 - 1493726 | 37509.4 |
| hypothetical protein | A33Q_1451 | Not Available | Negative | 1493734 - 1494804 | 41421.0 |
| glycosyltransferase | A33Q_1452 | Not Available | Negative | 1495550 - 1496635 | 41589.0 |
| hypothetical protein | A33Q_1453 | Not Available | Negative | 1497219 - 1497365 | 5294.24 |
| hypothetical protein | A33Q_1454 | Not Available | Negative | 1497388 - 1497501 | 4206.34 |
| hypothetical protein | A33Q_1455 | Not Available | Positive | 1497971 - 1498132 | 6366.86 |
| putative transposase | A33Q_1456 | Not Available | Negative | 1498267 - 1499004 | 27636.4 |
| hypothetical protein | A33Q_1457 | Not Available | Negative | 1499016 - 1499141 | 4753.6 |
| camp-binding protein | A33Q_1463 | Not Available | Negative | 1499301 - 1499933 | 25438.3 |
| hypothetical protein | A33Q_1464 | Not Available | Positive | 1500026 - 1500286 | 9980.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
