Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase fold protein | A33Q_1440 | Not Available | Positive | 1482394 - 1483287 | 33859.6 |
| rna polymerase ecf-type sigma factor | A33Q_1441 | Not Available | Positive | 1483296 - 1483802 | 19597.7 |
| hypothetical protein | A33Q_1442 | Not Available | Positive | 1483789 - 1484397 | 23922.8 |
| hypothetical protein | A33Q_1443 | Not Available | Positive | 1484500 - 1485057 | 21476.2 |
| tyrosine-protein kinase wzc | A33Q_1444 | Not Available | Negative | 1485543 - 1487996 | 93573.3 |
| polysaccharide export outer membrane protein | A33Q_1445 | Not Available | Negative | 1487993 - 1488727 | 27585.2 |
| hypothetical protein | A33Q_1446 | Not Available | Negative | 1489875 - 1491065 | 44716.1 |
| hypothetical protein | A33Q_1447 | Not Available | Positive | 1491687 - 1491812 | 4753.94 |
| hypothetical protein | A33Q_1448 | Not Available | Positive | 1491809 - 1491985 | 6634.92 |
| hypothetical protein | A33Q_1449 | Not Available | Positive | 1491985 - 1492140 | 5689.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
