Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter permease | A33Q_1420 | Not Available | Negative | 1456869 - 1459232 | 88146.0 |
| hypothetical protein | A33Q_1421 | Not Available | Negative | 1459240 - 1459359 | 4566.68 |
| duf819 domain-containing protein | A33Q_1422 | Not Available | Negative | 1459536 - 1460786 | 44403.7 |
| hypothetical protein | A33Q_1423 | Not Available | Positive | 1460749 - 1460862 | 4069.02 |
| putative nudix hydrolase yeab | A33Q_1424 | Not Available | Negative | 1460831 - 1461475 | 24418.4 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase protein | A33Q_1425 | Not Available | Negative | 1461472 - 1462224 | 28845.2 |
| isocitrate dehydrogenase phosphatase /kinase | A33Q_1426 | Not Available | Positive | 1462594 - 1464318 | 68288.8 |
| hypothetical protein | A33Q_1427 | Not Available | Negative | 1464390 - 1464824 | 15758.6 |
| hypothetical protein | A33Q_1428 | Not Available | Negative | 1464839 - 1466332 | 55018.6 |
| tonb-dependent receptor | A33Q_1429 | Not Available | Negative | 1466304 - 1469507 | 115570.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
