Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase/lipase-like protein | A33Q_1410 | Not Available | Positive | 1442253 - 1443215 | 34667.1 |
| response regulator receiver | A33Q_1411 | Not Available | Negative | 1443230 - 1443655 | 15868.2 |
| phytochrome, two-component sensor histidine kinase | A33Q_1412 | Not Available | Negative | 1443737 - 1444849 | 43188.4 |
| diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s) | A33Q_1413 | Not Available | Negative | 1444864 - 1448988 | 158594.0 |
| hypothetical protein | A33Q_1414 | Not Available | Negative | 1449108 - 1449224 | 4620.01 |
| carboxyl-terminal protease-related protein | A33Q_1415 | Not Available | Negative | 1449221 - 1450234 | 39045.3 |
| hypothetical protein | A33Q_1416 | Not Available | Negative | 1450231 - 1450998 | 29611.7 |
| hypothetical protein | A33Q_1417 | Not Available | Positive | 1451053 - 1451217 | 6328.75 |
| putative ftsx-related transmembrane transport protein | A33Q_1418 | Not Available | Negative | 1451500 - 1453905 | 89920.6 |
| putative ftsx-related transmembrane transport protein | A33Q_1419 | Not Available | Negative | 1454233 - 1456602 | 88101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
