Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1380 | Not Available | Negative | 1406508 - 1408235 | 64124.3 |
| hypothetical protein | A33Q_1381 | Not Available | Negative | 1408232 - 1408345 | 4536.85 |
| multi-sensor signal transduction histidine kinase | A33Q_1382 | Not Available | Positive | 1408488 - 1410257 | 68260.7 |
| integral membrane sensor signal transduction histidine kinase | A33Q_1383 | Not Available | Negative | 1410289 - 1411410 | 43172.3 |
| hydrolase of unknown specificity rsbq | A33Q_1384 | Not Available | Negative | 1411410 - 1412204 | 29306.1 |
| oxygen-insensitive nad(p)h nitroreductase | A33Q_1385 | Not Available | Positive | 1412670 - 1413302 | 23572.2 |
| phytochrome, two-component sensor histidine kinase | A33Q_1386 | Not Available | Negative | 1413341 - 1414288 | 36593.9 |
| phytochrome, two-component sensor histidine kinase | A33Q_1387 | Not Available | Negative | 1414294 - 1418187 | 150334.0 |
| outer membrane efflux protein | A33Q_1388 | Not Available | Negative | 1418541 - 1419875 | 51030.8 |
| iron-sulfur cluster assembly atpase protein sufc | A33Q_1389 | Not Available | Negative | 1419877 - 1420551 | 25362.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
