Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0127 | Not Available | Negative | 126355 - 126471 | 4445.33 |
| xaa-pro aminopeptidase | A33Q_0128 | Not Available | Negative | 126809 - 128098 | 49402.2 |
| peptidase, m16 family | A33Q_0129 | Not Available | Positive | 128526 - 129686 | 44383.3 |
| o-methyltransferase | A33Q_0130 | Not Available | Positive | 129689 - 130333 | 24104.5 |
| membrane-bound lytic murein transglycosylase d precursor | A33Q_0131 | Not Available | Positive | 130330 - 131937 | 60506.1 |
| hypothetical protein | A33Q_0132 | Not Available | Positive | 131962 - 132951 | 37342.1 |
| hypothetical protein | A33Q_0133 | Not Available | Negative | 132948 - 133298 | 13640.5 |
| dna polymerase iii subunits gamma and tau | A33Q_0134 | Not Available | Negative | 133541 - 134686 | 42904.7 |
| hypothetical protein | A33Q_0135 | Not Available | Negative | 134777 - 135565 | 30564.1 |
| Tmrna,resume consensus sequence (at 87): tataattggcgaatctaa | Not Available | Not Available | Positive | 135738 - 136142 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
