Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin containing monooxygenase | A33Q_1341 | Not Available | Positive | 1362745 - 1364076 | 51220.0 |
| tpr domain protein | A33Q_1342 | Not Available | Negative | 1364143 - 1364742 | 22595.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | A33Q_1343 | Not Available | Negative | 1364761 - 1365576 | 29209.5 |
| glycosyltransferase | A33Q_1344 | Not Available | Positive | 1365610 - 1366734 | 43136.0 |
| hypothetical protein | A33Q_1345 | Not Available | Negative | 1366731 - 1366862 | 5039.28 |
| mn-dependent transcriptional regulator mntr | A33Q_1346 | Not Available | Positive | 1367180 - 1367857 | 25759.0 |
| putative n-acyl-d-glucosamine 2-epimerase | A33Q_1347 | Not Available | Negative | 1368033 - 1369331 | 50347.9 |
| choline dehydrogenase | A33Q_1348 | Not Available | Negative | 1369464 - 1371071 | 59321.4 |
| hypothetical protein | A33Q_1349 | Not Available | Negative | 1371084 - 1371200 | 4263.37 |
| long-chain-fatty-acid--coa ligase | A33Q_1350 | Not Available | Negative | 1371187 - 1372860 | 61906.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
