Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1331 | Not Available | Negative | 1353598 - 1353720 | 4978.18 |
| fatty acid desaturase | A33Q_1332 | Not Available | Positive | 1353877 - 1354530 | 25830.2 |
| transcriptional regulator, meci family | A33Q_1333 | Not Available | Positive | 1354719 - 1355084 | 14178.2 |
| ferric siderophore transport system, periplasmic binding protein tonb | A33Q_1334 | Not Available | Positive | 1355088 - 1356713 | 62638.4 |
| hypothetical protein | A33Q_1335 | Not Available | Positive | 1356710 - 1356826 | 4521.75 |
| agmatinase | A33Q_1336 | Not Available | Negative | 1356818 - 1357885 | 39536.1 |
| putative phosphohistidine phosphatase, sixa | A33Q_1337 | Not Available | Negative | 1357998 - 1358462 | 17239.9 |
| dna topoisomerase i | A33Q_1338 | Not Available | Positive | 1358629 - 1360950 | 87657.3 |
| hypothetical protein | A33Q_1339 | Not Available | Positive | 1361086 - 1362063 | 36483.1 |
| nad-dependent protein deacetylase of sir2 family | A33Q_1340 | Not Available | Positive | 1362060 - 1362755 | 25778.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
