Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1321 | Not Available | Positive | 1345242 - 1346414 | 44359.9 |
| fructokinase | A33Q_1322 | Not Available | Positive | 1346416 - 1347336 | 34150.9 |
| outer membrane protein, ompa/motb family | A33Q_1323 | Not Available | Negative | 1347347 - 1349005 | 61457.0 |
| deoxyhypusine synthase | A33Q_1324 | Not Available | Negative | 1349036 - 1350007 | 36469.5 |
| hypothetical protein | A33Q_1325 | Not Available | Negative | 1350116 - 1350715 | 22541.5 |
| hypothetical protein | A33Q_1326 | Not Available | Negative | 1350819 - 1351025 | 7386.19 |
| deacetylase | A33Q_1327 | Not Available | Negative | 1351058 - 1351960 | 34185.0 |
| hypothetical protein | A33Q_1328 | Not Available | Negative | 1352040 - 1352582 | 20748.9 |
| hypothetical protein | A33Q_1329 | Not Available | Positive | 1352733 - 1353161 | 16355.5 |
| putative membrane protein | A33Q_1330 | Not Available | Negative | 1353163 - 1353531 | 12934.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
