Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylosidase/arabinosidase | A33Q_1311 | Not Available | Positive | 1332098 - 1333195 | 41433.3 |
| laci family transcriptional regulator | A33Q_1312 | Not Available | Positive | 1333527 - 1334558 | 38258.2 |
| alpha-glucuronidase | A33Q_1313 | Not Available | Positive | 1334581 - 1336698 | 80771.4 |
| two-component system response regulator | A33Q_1314 | Not Available | Negative | 1336733 - 1337443 | 27409.8 |
| putative two-component system sensor protein | A33Q_1315 | Not Available | Negative | 1337445 - 1338503 | 41593.4 |
| alpha/beta hydrolase fold protein | A33Q_1316 | Not Available | Positive | 1338844 - 1339725 | 32611.3 |
| 1,4-alpha-glucan (glycogen) branching enzyme, gh-13-type | A33Q_1317 | Not Available | Negative | 1339951 - 1341960 | 78347.6 |
| hypothetical protein | A33Q_1318 | Not Available | Negative | 1342067 - 1342282 | 8304.36 |
| hexuronate utilization operon transcriptional repressor exur | A33Q_1319 | Not Available | Negative | 1342361 - 1343413 | 39239.5 |
| sodium/glucose cotransporter 2 | A33Q_1320 | Not Available | Positive | 1343668 - 1345257 | 58793.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
