Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1301 | Not Available | Negative | 1323040 - 1323180 | 4743.67 |
| putative secreted glycosyl hydrolase | A33Q_1302 | Not Available | Positive | 1323697 - 1325109 | 53063.3 |
| myo-inositol 2-dehydrogenase | A33Q_1303 | Not Available | Positive | 1325121 - 1326470 | 50627.5 |
| hypothetical protein | A33Q_1304 | Not Available | Positive | 1326538 - 1326663 | 4905.04 |
| laci family transcriptional regulator | A33Q_1305 | Not Available | Negative | 1326684 - 1327658 | 36235.9 |
| hypothetical protein | A33Q_1306 | Not Available | Negative | 1327688 - 1327825 | 5286.53 |
| uronate isomerase | A33Q_1307 | Not Available | Positive | 1327884 - 1329314 | 55335.4 |
| d-mannonate oxidoreductase | A33Q_1308 | Not Available | Positive | 1329324 - 1330136 | 29395.7 |
| hypothetical protein | A33Q_1309 | Not Available | Positive | 1330288 - 1330668 | 14801.6 |
| mannonate dehydratase | A33Q_1310 | Not Available | Positive | 1330755 - 1331933 | 44622.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
