Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | A33Q_1291 | Not Available | Positive | 1312902 - 1313603 | 26720.9 |
| hypothetical protein | A33Q_1292 | Not Available | Negative | 1313640 - 1314608 | 35083.1 |
| 3-oxoacyl-[acyl-carrier protein] reductase | A33Q_1293 | Not Available | Positive | 1314747 - 1315514 | 27141.0 |
| butyryl-coa dehydrogenase | A33Q_1294 | Not Available | Positive | 1315526 - 1316728 | 44779.2 |
| putative aminoglycoside phosphotransferase | A33Q_1295 | Not Available | Positive | 1316721 - 1317761 | 39739.1 |
| 3-hydroxybutyryl-coa dehydrogenase | A33Q_1296 | Not Available | Positive | 1317766 - 1318644 | 32040.7 |
| sensor histidine kinase/response regulator | A33Q_1297 | Not Available | Positive | 1318891 - 1321284 | 91101.9 |
| putative cytosolic protein | A33Q_1298 | Not Available | Negative | 1321289 - 1322053 | 29111.0 |
| hypothetical protein | A33Q_1299 | Not Available | Negative | 1322356 - 1322607 | 9626.97 |
| hypothetical protein | A33Q_1300 | Not Available | Negative | 1322592 - 1323026 | 16470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
