Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metal chaperone, involved in zn homeostasis, gtpase of family | A33Q_1281 | Not Available | Positive | 1302561 - 1303769 | 46072.6 |
| dna recombination protein rmuc | A33Q_1282 | Not Available | Negative | 1303820 - 1305073 | 47519.5 |
| hydrolase, alpha/beta hydrolase fold family | A33Q_1283 | Not Available | Negative | 1305063 - 1306082 | 38279.1 |
| hypothetical protein | A33Q_1284 | Not Available | Positive | 1306307 - 1306978 | 25632.5 |
| hypothetical protein | A33Q_1285 | Not Available | Positive | 1306975 - 1307118 | 5505.71 |
| membrane protein | A33Q_1286 | Not Available | Positive | 1307115 - 1308455 | 47898.1 |
| patatin family protein | A33Q_1287 | Not Available | Positive | 1308588 - 1309616 | 38237.9 |
| putative ion-channel protein | A33Q_1288 | Not Available | Positive | 1309613 - 1310632 | 38456.2 |
| tyrosyl-trna synthetase | A33Q_1289 | Not Available | Positive | 1310747 - 1312039 | 48080.5 |
| hypothetical protein | A33Q_1290 | Not Available | Positive | 1312146 - 1312784 | 24510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
