Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | A33Q_1271 | Not Available | Positive | 1287988 - 1290333 | 87649.2 |
| hypothetical protein | A33Q_1272 | Not Available | Positive | 1290419 - 1291366 | 34807.0 |
| hypothetical protein | A33Q_1273 | Not Available | Positive | 1291445 - 1291903 | 17735.8 |
| secreted protein | A33Q_1274 | Not Available | Negative | 1291965 - 1292483 | 19217.7 |
| atp-dependent dna ligase ligc | A33Q_1275 | Not Available | Positive | 1292607 - 1294199 | 61547.9 |
| helicase domain protein | A33Q_1276 | Not Available | Positive | 1294216 - 1296639 | 92048.8 |
| membrane associated signal transduction histidine kinase | A33Q_1277 | Not Available | Positive | 1296806 - 1298731 | 74150.8 |
| potassium uptake protein trkh | A33Q_1278 | Not Available | Negative | 1298728 - 1300176 | 53730.6 |
| trk system potassium uptake protein trka | A33Q_1279 | Not Available | Negative | 1300181 - 1301524 | 49902.2 |
| tpr repeat-containing protein | A33Q_1280 | Not Available | Negative | 1301621 - 1302295 | 26327.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
