Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase iv subunit b | A33Q_1251 | Not Available | Negative | 1270308 - 1272221 | 72565.3 |
| dna topoisomerase iv subunit b | A33Q_1252 | Not Available | Negative | 1272263 - 1272757 | 19157.8 |
| hypothetical protein | A33Q_1253 | Not Available | Positive | 1272819 - 1272932 | 4475.68 |
| hypothetical protein | A33Q_1254 | Not Available | Positive | 1273150 - 1273455 | 11789.9 |
| glucokinase | A33Q_1255 | Not Available | Negative | 1273504 - 1274427 | 33548.9 |
| hypothetical protein | A33Q_1256 | Not Available | Negative | 1274481 - 1274969 | 19040.9 |
| hypothetical protein | A33Q_1257 | Not Available | Positive | 1275077 - 1275436 | 13894.8 |
| s1 rna binding domain protein | A33Q_1258 | Not Available | Negative | 1275433 - 1276260 | 31281.9 |
| 3-hydroxybutyryl-coa dehydrogenase | A33Q_1259 | Not Available | Positive | 1276407 - 1277294 | 32145.3 |
| deoxyadenosine kinase | A33Q_1260 | Not Available | Positive | 1277391 - 1278008 | 24029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
