Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1231 | Not Available | Negative | 1249341 - 1250399 | 40460.9 |
| hypothetical protein | A33Q_1232 | Not Available | Negative | 1250497 - 1250970 | 18583.7 |
| cold shock protein cspa | A33Q_1233 | Not Available | Negative | 1251109 - 1251567 | 17234.2 |
| xanthine and co dehydrogenases maturation factor, xdhc/coxf family | A33Q_1234 | Not Available | Positive | 1251806 - 1252912 | 40717.3 |
| ctp:molybdopterin cytidylyltransferase | A33Q_1235 | Not Available | Positive | 1253007 - 1253507 | 18917.8 |
| cysteine desulfurase | A33Q_1236 | Not Available | Negative | 1253509 - 1254651 | 41540.9 |
| hypothetical protein | A33Q_1237 | Not Available | Positive | 1254736 - 1255098 | 14245.0 |
| isoquinoline 1-oxidoreductase beta subunit | A33Q_1238 | Not Available | Negative | 1255134 - 1257296 | 79530.8 |
| isoquinoline 1-oxidoreductase alpha subunit | A33Q_1239 | Not Available | Negative | 1257299 - 1257757 | 16422.5 |
| myo-inositol 2-dehydrogenase | A33Q_1240 | Not Available | Positive | 1257971 - 1259116 | 42944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
