Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1223 | Not Available | Positive | 1237121 - 1238656 | 57159.5 |
| hypothetical protein | A33Q_1224 | Not Available | Positive | 1238662 - 1239876 | 44989.5 |
| hypothetical protein | A33Q_1225 | Not Available | Positive | 1239883 - 1240248 | 13884.3 |
| nad-dependent glyceraldehyde-3-phosphate dehydrogenase | A33Q_1226 | Not Available | Negative | 1240256 - 1241248 | 36153.4 |
| Trna-glu | Not Available | Not Available | Positive | 1241532 - 1241606 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1241646 - 1241720 | Not Available |
| hypothetical protein | A33Q_1227 | Not Available | Negative | 1241853 - 1244057 | 83954.6 |
| secreted protein containing n-terminal zinc-dependent carboxypeptidase related domain protein | A33Q_1228 | Not Available | Negative | 1244161 - 1246707 | 95909.7 |
| putative multi-domain protein | A33Q_1229 | Not Available | Positive | 1246826 - 1247587 | 28051.4 |
| sodium-dependent transporter (hunadc-1), putative | A33Q_1230 | Not Available | Negative | 1247667 - 1249127 | 53098.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
