Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1193 | Not Available | Negative | 1204170 - 1204286 | 4092.32 |
| hypothetical protein | A33Q_1194 | Not Available | Positive | 1204354 - 1204479 | 4887.24 |
| cold-shock dead-box protein a | A33Q_1195 | Not Available | Positive | 1204491 - 1205849 | 50309.6 |
| beta-lactamase class c and other penicillin binding protein | A33Q_1196 | Not Available | Negative | 1205958 - 1207193 | 46705.6 |
| putative oxidoreductase | A33Q_1197 | Not Available | Positive | 1207355 - 1208608 | 46408.9 |
| hypothetical protein | A33Q_1198 | Not Available | Positive | 1208610 - 1209998 | 53096.6 |
| aldehyde reductase | A33Q_1199 | Not Available | Positive | 1210100 - 1211020 | 34951.6 |
| ribonuclease bn | A33Q_1200 | Not Available | Positive | 1211029 - 1211937 | 33417.4 |
| hypothetical protein | A33Q_1201 | Not Available | Negative | 1212018 - 1212317 | 11502.4 |
| outer membrane protein, omp85 family, putative | A33Q_1202 | Not Available | Negative | 1212326 - 1214740 | 93488.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
