Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | A33Q_0107 | Not Available | Negative | 109952 - 110647 | 25969.2 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | A33Q_0108 | Not Available | Negative | 110741 - 111706 | 36528.8 |
| abc transporter efflux protein | A33Q_0109 | Not Available | Positive | 111914 - 113158 | 44964.9 |
| reca protein | A33Q_0110 | Not Available | Negative | 113243 - 114274 | 36880.9 |
| atp-dependent exodnase (exonuclease v) alpha subunit - helicase superfamily i member | A33Q_0111 | Not Available | Positive | 114452 - 115240 | 30271.7 |
| phosphate regulon transcriptional regulatory protein phob (sphr) | A33Q_0112 | Not Available | Positive | 115394 - 116083 | 26326.8 |
| phosphate regulon sensor protein phor (sphs) | A33Q_0113 | Not Available | Positive | 116088 - 117128 | 39076.7 |
| hypothetical protein | A33Q_0114 | Not Available | Positive | 117564 - 118043 | 18614.1 |
| ribosomal large subunit pseudouridine synthase c | A33Q_0115 | Not Available | Positive | 118132 - 118866 | 28299.2 |
| lsu ribosomal protein l13p (l13ae) | A33Q_0116 | Not Available | Positive | 118988 - 119431 | 16556.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
