Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type transport system, small permease component | A33Q_1173 | Not Available | Positive | 1184531 - 1185016 | 18272.2 |
| trap-type c4-dicarboxylate transport system, large permease component | A33Q_1174 | Not Available | Positive | 1185016 - 1186311 | 45410.7 |
| hypothetical protein | A33Q_1175 | Not Available | Negative | 1186315 - 1186638 | 12326.6 |
| hypothetical protein | A33Q_1176 | Not Available | Positive | 1186857 - 1187609 | 29398.4 |
| lipoprotein | A33Q_1177 | Not Available | Negative | 1187628 - 1188089 | 17242.1 |
| glycogen phosphorylase | A33Q_1178 | Not Available | Positive | 1188283 - 1190826 | 97127.4 |
| hypothetical protein | A33Q_1179 | Not Available | Negative | 1190904 - 1191662 | 28782.2 |
| sulfatase modifying factor 1 precursor (c-alpha-formyglycine- generating enzyme 1) | A33Q_1180 | Not Available | Negative | 1191735 - 1192793 | 39900.7 |
| hypothetical protein | A33Q_1181 | Not Available | Negative | 1192850 - 1193914 | 41803.5 |
| putative fatty acid hydroxylase | A33Q_1182 | Not Available | Negative | 1194109 - 1194738 | 24665.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
