Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | A33Q_1154 | Not Available | Negative | 1168655 - 1169491 | 31388.0 |
| Trna-arg | Not Available | Not Available | Positive | 1169623 - 1169699 | Not Available |
| succinyl-coa ligase | A33Q_1155 | Not Available | Negative | 1169731 - 1170942 | 43203.0 |
| lipoprotein releasing system atp-binding protein lold | A33Q_1156 | Not Available | Positive | 1171082 - 1171759 | 24633.8 |
| hypothetical protein | A33Q_1157 | Not Available | Negative | 1171770 - 1172219 | 15563.3 |
| thiol peroxidase, bcp-type | A33Q_1158 | Not Available | Negative | 1172313 - 1172525 | 8208.02 |
| hypothetical protein | A33Q_1159 | Not Available | Positive | 1172526 - 1172690 | 5988.25 |
| hypothetical protein | A33Q_1160 | Not Available | Positive | 1172707 - 1172847 | 5200.32 |
| permease of the drug/metabolite transporter (dmt) superfamily | A33Q_1161 | Not Available | Positive | 1172901 - 1173725 | 30552.1 |
| nicotinate phosphoribosyltransferase | A33Q_1162 | Not Available | Positive | 1173770 - 1175254 | 55435.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
