Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent protease with chaperone function | A33Q_1134 | Not Available | Positive | 1150586 - 1151434 | 31403.9 |
| dna pol iii epsilon chain | A33Q_1135 | Not Available | Negative | 1151480 - 1152286 | 30793.0 |
| cytoplasmic peptidoglycan synthetase | A33Q_1136 | Not Available | Negative | 1152286 - 1153659 | 52231.7 |
| replicative dna helicase | A33Q_1137 | Not Available | Positive | 1153879 - 1155486 | 59169.8 |
| alcohol dehydrogenase | A33Q_1138 | Not Available | Positive | 1155537 - 1156607 | 39236.4 |
| hypothetical protein | A33Q_1139 | Not Available | Negative | 1156604 - 1156939 | 12981.2 |
| electron transfer flavoprotein, beta subunit | A33Q_1140 | Not Available | Positive | 1157013 - 1157750 | 26627.4 |
| electron transfer flavoprotein, alpha subunit | A33Q_1141 | Not Available | Positive | 1157786 - 1158754 | 33423.0 |
| hypothetical protein | A33Q_1142 | Not Available | Positive | 1158760 - 1159368 | 22628.0 |
| nucleoside permease nupc | A33Q_1143 | Not Available | Positive | 1159472 - 1160758 | 45251.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
