Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | A33Q_1104 | Not Available | Positive | 1115069 - 1116178 | 39739.5 |
| hypothetical protein | A33Q_1105 | Not Available | Positive | 1116278 - 1116715 | 16340.0 |
| hypothetical protein | A33Q_1106 | Not Available | Negative | 1116730 - 1117191 | 17880.4 |
| hypothetical protein | A33Q_1107 | Not Available | Positive | 1117645 - 1119534 | 72195.5 |
| hypothetical protein | A33Q_1108 | Not Available | Negative | 1119777 - 1120118 | 12783.0 |
| hypothetical protein | A33Q_1109 | Not Available | Positive | 1120541 - 1120819 | 10679.0 |
| hypothetical protein | A33Q_1110 | Not Available | Positive | 1121015 - 1122373 | 52394.1 |
| hypothetical protein | A33Q_1111 | Not Available | Negative | 1122370 - 1123794 | 53430.0 |
| two-component system response regulator protein | A33Q_1112 | Not Available | Positive | 1124098 - 1124517 | 15884.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | A33Q_1113 | Not Available | Negative | 1124520 - 1125776 | 47876.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
