Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_1084 | Not Available | Negative | 1090010 - 1090153 | 5546.58 |
| hypothetical protein | A33Q_1085 | Not Available | Positive | 1090480 - 1090776 | 11253.4 |
| glucose dehydrogenase, pqq-dependent | A33Q_1086 | Not Available | Positive | 1090960 - 1093227 | 84591.1 |
| hypothetical protein | A33Q_1087 | Not Available | Positive | 1093439 - 1094518 | 40042.3 |
| endo-1,4-beta-xylanase a precursor | A33Q_1088 | Not Available | Positive | 1094563 - 1095735 | 43663.8 |
| hypothetical protein | A33Q_1089 | Not Available | Negative | 1095846 - 1096619 | 29599.5 |
| gluconolactonase | A33Q_1090 | Not Available | Negative | 1096849 - 1098672 | 67609.5 |
| endo-1,4-beta-xylanase a precursor | A33Q_1091 | Not Available | Negative | 1098892 - 1100001 | 41653.8 |
| ketoglutarate semialdehyde dehydrogenase | A33Q_1092 | Not Available | Negative | 1100082 - 1101533 | 53147.0 |
| fumarylacetoacetate hydrolase family protein | A33Q_1093 | Not Available | Negative | 1101619 - 1102452 | 31843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
