Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pseudo | Not Available | Not Available | Positive | 103119 - 103193 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 103372 - 103445 | Not Available |
| abc transporter, atp-binding protein | A33Q_0099 | Not Available | Negative | 103870 - 105432 | 58506.9 |
| hypothetical protein | A33Q_0100 | Not Available | Positive | 105470 - 105613 | 5392.81 |
| hypothetical protein | A33Q_0101 | Not Available | Positive | 105687 - 106934 | 49336.1 |
| hypothetical protein | A33Q_0102 | Not Available | Positive | 107013 - 107234 | 8698.75 |
| phosphate regulon transcriptional regulatory protein phob (sphr) | A33Q_0103 | Not Available | Negative | 107263 - 107988 | 27753.7 |
| autolysin sensor kinase | A33Q_0104 | Not Available | Negative | 107991 - 109031 | 39821.3 |
| hypothetical protein | A33Q_0105 | Not Available | Negative | 109041 - 109829 | 28599.0 |
| hypothetical protein | A33Q_0106 | Not Available | Positive | 109869 - 109985 | 4355.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
