Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain protein | A33Q_1074 | Not Available | Negative | 1078381 - 1078767 | 14932.2 |
| hypothetical protein | A33Q_1075 | Not Available | Negative | 1078769 - 1078960 | 7301.06 |
| two-component system regulatory protein | A33Q_1076 | Not Available | Negative | 1079128 - 1079850 | 27831.8 |
| hypothetical protein | A33Q_1077 | Not Available | Negative | 1079847 - 1080581 | 28175.3 |
| sensor histidine kinase | A33Q_1078 | Not Available | Negative | 1080931 - 1081998 | 40882.7 |
| hypothetical protein | A33Q_1079 | Not Available | Negative | 1082143 - 1082658 | 20259.4 |
| hypothetical protein | A33Q_1080 | Not Available | Negative | 1082798 - 1085260 | 92890.4 |
| membrane protein, putative | A33Q_1081 | Not Available | Negative | 1085313 - 1088846 | 134717.0 |
| abc transporter atp-binding protein | A33Q_1082 | Not Available | Negative | 1088911 - 1089783 | 32124.1 |
| hypothetical protein | A33Q_1083 | Not Available | Negative | 1089884 - 1090000 | 4129.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
